Protein ZmIAA5 | |
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Information | |
Coreg Name: | ZmIAA5 |
Species: | Maize |
Coreg Family: | Aux/IAA |
Gene Name(Synonym): | IAA8 |
Uniprot ID: | B4FF21 |
ZmIAA5 is a protein in the Aux/IAA family.
Overview of domains present in v5 transcripts | |
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PF02309 | |
Zm00001eb122410_T001 | |
Zm00001eb122410_T002 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d039624 | DAPseq | sequence | fimo | position | |
Zm00001d039624 | DAPseq | sequence | fimo | position | |
Zm00001d039624 | ChIPseq | sequence | fimo | position | |
Zm00001d039624 | PChIPseq | sequence | fimo | position |
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAIALVHFHSTKSRPMRHTPLGVGTHA
RTGVLKERGNSAGLDEDLHVR
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAIALVHFHSTKSRPMRHTPLGVGTHA
RTGVLKERGNSAGLDEDLHVR
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAIALVHFHSTKSRPMRHTPLGVGTHA
RTGVLKERGNSAGLDEDLHVR
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAIALVHFHSTKSRPMRHTPLGVGTHA
RTGVLKERGNSAGLDEDLHVR
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAIALVHFHSTKSRPMRHTPLGVGTHA
RTGVLKERGNSAGLDEDLHVR
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF02309 |
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Hover here to show all domains |
CTATCGCGACCTGACGGGTGAGTGA...
CTATCGCGACCTGACGGGTGAGTGACCCGCGGCCCACTATAACCAAACCAACCTCCCCCTCCCCCTCCCCCCGACCTCTCTGCCTTTTCCTTTTCCTTCCCCCGCTTTCTCCTTCCTTCCTCCTCCTCCCGGCTCCCCTCACCCAGCCACCGGCCATGTCGGTGGAGACGGAGCGGAGCTCCACCGAGTCCTCCGGGGCTTCCGGGCTCGACTTCGAGGACACCGCGCTCACGCTCACCCTCCGCCTCCCGGGCTCCGCGCCTTCCGCCGCCGCCGCCGCCGCGGCTTCCCTGTCCCTCTCCTCCTCGTCGTCCTCCGCCTTCCCCGACCCCGACCGCAAGCGCGCCTCCTCCGACGCTGACCCCGGCCGCTCCTCCCCGCTCGCCGCGTCCTCCGACGCTGCACCGGCACCCAAGGCTCGTGTGGTGGGCTGGCCGCCGGTGAGGTCGTACCGCAAGAACGCGCTCGCCGACGCCGCGGGCTCCAGCAAGGCCGCCAAGTTCGTCAAGGTGGCCGTCGACGGCGCGCCCTACCTGCGGAAGGTGGACCTGCAGGCGTACGCCGGCTACGACCAGCTGCTCCGCGCGCTCCAGGACAAGTTCTTCTCCCACTTCACCATCAGGAAGTTCGCCGACGACGAGAGGAAGCTGGTGGACGCGGTGAACGGGACGGAGTACGTACCCACGTACGAGGACAAGGATGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGATGTTCGTGGAAACCTGCCAGCGCCTTCGTCTGATGAAAGGTTCAGAGGCCGTGAACTTGGCCATCGCTCTTGTTCATTTTCACAGCACCAAGAGCCGCCCGATGAGGCACACTCCGTTGGGCGTTGGCACGCACGCACGCACTGGCGTCTTGAAGGAAAGGGGGAACTCTGCTGGTCTTGATGAGGATCTTCACGTGAGATAGGAACGTGTGTACAGTTGTCGCCTTATGGTATTGAGTTGAGGAAACTTGGAAGTTCCATTACTTGTCTGTAGTCTCTACTTTATATAGATGCGAAGAAGCTTGAGATACACATTGCCTACAATGTCTTTTGATGAATAAGACCAGACAGCACCGAACCGAACTCGTCCTCCACACGGTTGCTTTGCCATCTCGGTGGTTTTGTGGTGGTGGTGGTGGTCGTGCTTCCTATAGGTGTGAGGCTGATGGCGTGGCTGCCATTTATACAATCTTTAATCGTGTTTTGTTGAGCTTTATTATATGGTTTTGTTTGAGAGTTCATGGCTCTGCATCCTGTTCCTACGGGATGCTGGTCAGCTTTTCCCCTAGCAAGTACATTCTGGTTTGCTTCGTCTCCTCGTCGTGCCTGTTTGTTTCGTCGTAACACTGGCTGACATGCGTAACAAAGCTTGATGTTCCACTCCCGTTCATGCGCAGTAGGATGTTTCAATGGTTATAGTTGGGCTGAAACTAGTTGGTGACGATCTAGGATTTAATTTATGCAAGAATTTAAAGAAGCCT
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAPRAAR
GTGACCCGCGGCCCACTATAACCAA...
GTGACCCGCGGCCCACTATAACCAAACCAACCTCCCCCTCCCCCTCCCCCCGACCTCTCTGCCTTTTCCTTTTCCTTCCCCCGCTTTCTCCTTCCTTCCTCCTCCTCCCGGCTCCCCTCACCCAGCCACCGGCCATGTCGGTGGAGACGGAGCGGAGCTCCACCGAGTCCTCCGGGGCTTCCGGGCTCGACTTCGAGGACACCGCGCTCACGCTCACCCTCCGCCTCCCGGGCTCCGCGCCTTCCGCCGCCGCCGCCGCCGCGGCTTCCCTGTCCCTCTCCTCCTCGTCGTCCTCCGCCTTCCCCGACCCCGACCGCAAGCGCGCCTCCTCCGACGCTGACCCCGGCCGCTCCTCCCCGCTCGCCGCGTCCTCCGACGCTGCACCGGCACCCAAGGCTCGTGTGGTGGGCTGGCCGCCGGTGAGGTCGTACCGCAAGAACGCGCTCGCCGACGCCGCGGGCTCCAGCAAGGCCGCCAAGTTCGTCAAGGTGGCCGTCGACGGCGCGCCCTACCTGCGGAAGGTGGACCTGCAGGCGTACGCCGGCTACGACCAGCTGCTCCGCGCGCTCCAGGACAAGTTCTTCTCCCACTTCACCATCAGGAAGTTCGCCGACGACGAGAGGAAGCTGGTGGACGCGGTGAACGGGACGGAGTACGTACCCACGTACGAGGACAAGGATGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGATGTTCGTGGAAACCTGCCAGCGCCTTCGTCTGATGAAAGGTTCAGAGGCCGTGAACTTGGCACCAAGAGCCGCCCGATGAGGCACACTCCGTTGGGCGTTGGCACGCACGCACGCACTGGCGTCTTGAAGGAAAGGGGGAACTCTGCTGGTCTTGATGAGGATCTTCACGTGAGATAGGAACGTGTGTACAGTTGTCGCCTTATGGTATTGAGTTGAGGAAACTTGGAAGTTCCATTACTTGTCTGTAGTCTCTACTTTATATAGATGCGAAGAAGCTTGAGATACACATTGCCTACAATGTCTTTTGATGAATAAGACCAGACAGCACCGAACCGAACTCGTCCTCCACACGGTTGCTTTGCCATCTCGGTGGTTTTGTGGTGGTGGTGGTGGTCGTGCTTCCTATAGGTGTGAGGCTGATGGCGTGGCTGCCATTTATACAATCTTTAATCGTGTTTTGTTGAGCTTTATTATATGGTTTTGTTTGAGAGTTCATGGCTCTGCATCCTGTTCCTACGGGATGCTGGTCAGCTTTTCCCCTAGCAAGTACATTCTGGTTTGCTTCGTCTCCTCGTCGTGCCTGTTTGTTTCGTCGTAACACTGGCTGACATGCGTAACAAAGCTTGATGTTCCACTCCCGTTCATGCGCAGTAGGATGTTTCAATGGTTATAGTTGGGCTGAAACTAGTTGGTGACGATCTAGGATTTAATTTATGCAAGAATTTAAAGAAGCCT
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAPRAAR
CCCGACCTCTCTGCCTTTTCCTTTT...
CCCGACCTCTCTGCCTTTTCCTTTTCCTTCCCCCGCTTTCTCCTTCCTTCCTCCTCCTCCCGGCTCCCCTCACCCAGCCACCGGCCATGTCGGTGGAGACGGAGCGGAGCTCCACCGAGTCCTCCGGGGCTTCCGGGCTCGACTTCGAGGACACCGCGCTCACGCTCACCCTCCGCCTCCCGGGCTCCGCGCCTTCCGCCGCCGCCGCCGCCGCGGCTTCCCTGTCCCTCTCCTCCTCGTCGTCCTCCGCCTTCCCCGACCCCGACCGCAAGCGCGCCTCCTCCGACGCTGACCCCGGCCGCTCCTCCCCGCTCGCCGCGTCCTCCGACGCTGCACCGGCACCCAAGGCTCGTGTGGTGGGCTGGCCGCCGGTGAGGTCGTACCGCAAGAACGCGCTCGCCGACGCCGCGGGCTCCAGCAAGGCCGCCAAGTTCGTCAAGGTGGCCGTCGACGGCGCGCCCTACCTGCGGAAGGTGGACCTGCAGGCGTACGCCGGCTACGACCAGCTGCTCCGCGCGCTCCAGGACAAGTTCTTCTCCCACTTCACCATCAGGAAGTTCGCCGACGACGAGAGGAAGCTGGTGGACGCGGTGAACGGGACGGAGTACGTACCCACGTACGAGGACAAGGATGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGATGTTCGTGGAAACCTGCCAGCGCCTTCGTCTGATGAAAGGTTCAGAGGCCGTGAACTTGGCACCAAGAGCCGCCCGATGAGGCACACTCCGTTGGGCGTTGGCACGCACGCACGCACTGGCGTCTTGAAGGAAAGGGGGAACTCTGCTGGTCTTGATGAGGATCTTCACGTGAGATAGGAACGTGTGTACAGTTGTCGCCTTATGGTATTGAGTTGAGGAAACTTGGAAGTTCCATTACTTGTCTGTAGTCTCTACTTTATATAGATGCGAAGAAGCTTGAGATACACATTGCCTACAATGTCTTTTGATGAATAAGACCAGACAGCACCGAACCGAACTCGTCCTCCACACGGTTGCTTTGCCATCTCGGTGGTTTTGTGGTGGTGGTGGTGGTCGTGCTTCCTATAGGTGTGAGGCTGATGGCGTGGCTGCCATTTATACAATCTTTAATCGTGTTTTGTTGAGCTTTATTATATGGTTTTGTTTGAGAGTTCA
MSVETERSSTESSGASGLDFEDTALTLTLRLPGSAPSAAAAAAASLSLSSSSSSAFPDPDRKRASSDADPGRSSPLAASS
DAAPAPKARVVGWPPVRSYRKNALADAAGSSKAAKFVKVAVDGAPYLRKVDLQAYAGYDQLLRALQDKFFSHFTIRKFAD
DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKGSEAVNLAPRAAR
CTATCGCGACCTGACGGGTGAGTGA...
CTATCGCGACCTGACGGGTGAGTGACCCGCGGCCCACTATAACCAAACCAACCTCCCCCTCCCCCTCCCCCCGACCTCTCTGCCTTTTCCTTTTCCTTCCCCCGCTTTCTCCTTCCTTCCTCCTCCTCCCGGCTCCCCTCACCCAGCCACCGGCCATGTCGGTGGAGACGGAGCGGAGCTCCACCGAGTCCTCCGGGGCTTCCGGGCTCGACTTCGAGGACACCGCGCTCACGCTCACCCTCCGCCTCCCGGGCTCCGCGCCTTCCGCCGCCGCCGCCGCCGCGGCTTCCCTGTCCCTCTCCTCCTCGTCGTCCTCCGCCTTCCCCGACCCCGACCGCAAGCGCGCCTCCTCCGACGCTGACCCCGGCCGCTCCTCCCCGCTCGCCGCGTCCTCCGACGCTGCACCGGCACCCAAGGCTCGTGTGGTGGGCTGGCCGCCGGTGAGGTCGTACCGCAAGAACGCGCTCGCCGACGCCGCGGGCTCCAGCAAGGCCGCCAAGTTCGTCAAGGTGGCCGTCGACGGCGCGCCCTACCTGCGGAAGGTGGACCTGCAGGCGTACGCCGGCTACGACCAGCTGCTCCGCGCGCTCCAGGACAAGTTCTTCTCCCACTTCACCATCAGGAAGTTCGCCGACGACGAGAGGAAGCTGGTGGACGCGGTGAACGGGACGGAGTACGTACCCACGTACGAGGACAAGGATGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGATGTTCGTGGAAACCTGCCAGCGCCTTCGTCTGATGAAAGGTTCAGAGGCCGTGAACTTGGCACCAAGAGCCGCCCGATGAGGCACACTCCGTTGGGCGTTGGCACGCACGCACGCACTGGCGTCTTGAAGGAAAGGGGGAACTCTGCTGGTCTTGATGAGGATCTTCACGTGAGATAGGAACGTGTGTACAGTTGTCGCCTTATGGTATTGAGTTGAGGAAACTTGGAAGTTCCATTACTTGTCTGTAGTCTCTACTTTATATAGATGCGAAGAAGCTTGAGATACACATTGCCTACAATGTCTTTTGATGAATAAGACCAGACAGCACCGAACCGAACTCGTCCTCCACACGGTTGCTTTGCCATCTCGGTGGTTTTGTGGTGGTGGTGGTGGTCGTGCTTCCTATAGGTGTGAGGCTGATGGCGTGGCTGCCATTTATACAATCTTTAATCGTGTTTTGTTGAGCTTTATTATATGGTTTTGTTTGAGAGTTCATGGCTCTGCATCCTGTTCCTACGGGATGCTGGTCAGCTTTTCCCCTAGCAAGTACATTCTGGTTTGCTTCGTCTCCTCGTCGTGCCTGTTTGTTTCGTCGTAACACTGGCTGACATGCGTAACAAAGCTTGATGTTCCACTCCCGTTCATGCGCAGTAGGATGTTTCAATGGTTATAGTTGGGCTGAAACTAGTTGGTGACGATCTAGGATTTAATTTATGCAAGAATTTAAAGAAGCCT
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